BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025E08SP1|AL428401
(832 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1106 1630 0.0
>3x_Contig1106
Length = 5510
Score = 1630 bits (821), Expect = 0.0
Identities = 826/829 (99%)
Strand = Plus / Plus
Query: 4 cgactaagtatcgttgttcattcaaaaccataagttcttctctgtacttctttacttccg 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3134 cgactaagtatcgttgttcattcaaaaccataagttcttctctgtacttctttacttccg 3193
Query: 64 caattgttaaattattgaacaaaagatccgatgatgttgtgacttctactttctgtgaca 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3194 caattgttaaattattgaacaaaagatccgatgatgttgtgacttctactttctgtgaca 3253
Query: 124 cagggttcaagatttctggtatttttttcaagggtagcattttctcctcgatgaacgctg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3254 cagggttcaagatttctggtatttttttcaagggtagcattttctcctcgatgaacgctg 3313
Query: 184 atgcatgtagggcaattgactgttgtattttcttctctgctgttgattttgtatccaact 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3314 atgcatgtagggcaattgactgttgtattttcttctctgctgttgattttgtatccaact 3373
Query: 244 gaacaatgctttttgataatttgtcataaagcgttaaattttgtaatagctttcttctta 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3374 gaacaatgctttttgataatttgtcataaagcgttaaattttgtaatagctttcttctta 3433
Query: 304 attgtgctaggttttgaatcgcagtctcatctgaagcgggtgcattatgtatcgaatcta 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3434 attgtgctaggttttgaatcgcagtctcatctgaagcgggtgcattatgtatcgaatcta 3493
Query: 364 atgctttctggaatctggggagtaaatttactacaagcgtttcgaggttgtggagatttt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3494 atgctttctggaatctggggagtaaatttactacaagcgtttcgaggttgtggagatttt 3553
Query: 424 cgtactgttgtaaaawttccggtagtttcaatgccttactaaattggagcttacgctttg 483
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3554 cgtactgttgtaaaatttccggtagtttcaatgccttactaaattggagcttacgctttg 3613
Query: 484 caaagacatacctcagacaggaggaacaaattctaactcctgtagaaaggtctgatattg 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3614 caaagacatacctcagacaggaggaacaaattctaactcctgtagaaaggtctgatattg 3673
Query: 544 cttttaagttcccgacattctcgaaggaaagggctggggccgcactcatcaggttcagga 603
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 3674 cttttaagttcccgacattctcgaaggaaaggtctggggccgcactcatcaggttcagga 3733
Query: 604 ctggaatatcgctggaacatcgagtttcttgtctatcgcacacgatctgaccgcataatc 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3734 ctggaatatcgctggaacatcgagtttcttgtctatcgcacacgatctgaccgcataatc 3793
Query: 664 tacaatgatgtttccgcatcaagagtccaaacggctgagagcatatgccgcattgggttg 723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3794 tacaatgatgtttccgcatcaagagtccaaacggctgagagcatatgccgcattgggttg 3853
Query: 724 ccatttgatcatccttccactctacgattgatcgttccaaagctataattcctgctctga 783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3854 ccatttgatcatccttccactctacgattgatcgttccaaagctataattcctgctctga 3913
Query: 784 tcctgaacgttgcaaagaccgatgactgatgtcgtacatgtaawtgaat 832
||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 3914 tcctgaacgttgcaaagaccgatgactgatgtcgtacatgtaattgaat 3962
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5888
Number of Sequences: 1807
Number of extensions: 5888
Number of successful extensions: 35
Number of sequences better than 1.0e-20: 1
length of query: 832
length of database: 10,358,551
effective HSP length: 16
effective length of query: 816
effective length of database: 10,329,639
effective search space: 8428985424
effective search space used: 8428985424
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)